Poxvirus Breakthrough: E5 Polymerase Activation Key to Efficient Genome Replication and RNA Primer Synthesis

September 2, 2026
Poxvirus Breakthrough: E5 Polymerase Activation Key to Efficient Genome Replication and RNA Primer Synthesis
  • Activation occurs when the E5-bound polymerase triggers large-scale conformational changes that unfold the E5 DNA entry channel, activating helicase activity and boosting primase function.

  • The MPXV replisome consists of a hexameric E5 helicase–primase complex and the polymerase holoenzyme (F8–A22–E4); assembly requires DNA templates and hairpin structures, with DNA binding guiding proper complex formation.

  • In RNA elongation, the RNA recognition motifs shift their contacts, allowing room for the RNA product and potentially altering how the helicase engages the core complex.

  • The E5A ZBM and RRM coordinate with the polymerase to position the active site for RNA primer synthesis, with AlphaFold-predicted arrangements mirroring a conserved active-site setup similar to human PrimPol, including metal and nucleotide binding.

  • Functional assays show primase activity is enhanced by the polymerase, and disrupting polymerase–E5 interactions impairs RNA primer synthesis and overall replisome function.

  • Cryo-EM reveals two main structural regions: a ring-shaped E5 helicase and an irregular polymerase–E5 primase region, with E5A/E5F primase domains engaging F8 thumb and A22 to enable coordinated action.

  • Mutations that disrupt polymerase–E5 interfaces hinder replisome assembly and block helicase/primase activation, underscoring tight physical coupling between components.

  • The ssDNA passes through the E5 hexamer center toward the polymerase, with stabilizing contacts from E5A’s RRM and ZBM and F8 thumb residues guiding DNA through the replisome.

  • Overall significance: The findings show how MPXV coordinates helicase and primase activities with the polymerase to drive genome replication and primer synthesis, highlighting potential antiviral targets and advancing poxvirus biology.

  • Introductory overview: The study examines how the MPXV replisome operates, focusing on E5 helicase–primase and its interaction with the DNA polymerase holoenzyme to propel replication and RNA primer production.

  • Evidence for fork engagement: Density patterns for ssDNA bridging E5 and polymerase and a forked DNA substrate support a model where the replisome engages replication forks and accommodates dsDNA regions during elongation.

  • Single-molecule data from optical-tweezer experiments show polymerase presence markedly enhances E5 helicase activity, reducing pausing at higher polymerase concentrations and supporting polymerase-driven activation.

Summary based on 1 source


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